Query to add a new column to indicate if a certain record is within the observation period
Source:R/addDemographicsQuery.R
addInObservationQuery.Rd
`r lifecycle::badge("experimental")` Same as `addInObservation()`, except query is not computed to a table.
Usage
addInObservationQuery(
x,
indexDate = "cohort_start_date",
window = c(0, 0),
completeInterval = FALSE,
nameStyle = "in_observation"
)
Arguments
- x
Table with individuals in the cdm.
- indexDate
Variable in x that contains the date to compute the observation flag.
- window
window to consider events of.
- completeInterval
If the individuals are in observation for the full window.
- nameStyle
Name of the new columns to create, it must contain "window_name" if multiple windows are provided.
Examples
# \donttest{
cdm <- mockPatientProfiles()
cdm$cohort1 %>%
addInObservationQuery()
#> # Source: SQL [10 x 5]
#> # Database: DuckDB v1.1.1 [unknown@Linux 6.5.0-1025-azure:R 4.4.1/:memory:]
#> cohort_definition_id subject_id cohort_start_date cohort_end_date
#> <int> <int> <date> <date>
#> 1 2 1 1946-05-20 1965-01-25
#> 2 2 2 1998-12-23 1999-08-08
#> 3 2 3 1926-08-03 1927-01-13
#> 4 3 4 1995-11-26 2001-02-07
#> 5 1 5 1953-07-20 1968-01-20
#> 6 3 6 1979-02-04 1981-11-02
#> 7 2 7 1957-01-27 1960-07-25
#> 8 2 8 1915-06-28 1937-04-22
#> 9 2 9 1967-10-06 1987-10-15
#> 10 1 10 1978-06-22 1979-08-27
#> # ℹ 1 more variable: in_observation <int>
mockDisconnect(cdm = cdm)
# }