Pushes test population into a blank CDM.

Usage

patientsCDM(
  pathJson = NULL,
  testName = NULL,
  cdmVersion = "5.3",
  cdmName = NULL
)

Arguments

pathJson: Directory where the sample populations in json are located. If NULL, gets the default inst/testCases directory.
testName: Name of the sample population JSON file. If NULL it will push the first sample population in the testCases directory.
cdmVersion: cdm version, default "5.3".
cdmName: Name of the cdm, default NULL.

Value

A CDM reference object with a sample population.

Examples

# \donttest{
filePath <- system.file("extdata", "testPatientsRSV.xlsx", package = "TestGenerator")
TestGenerator::readPatients(filePath = filePath, outputPath = tempdir())
#> ✔ Unit Test Definition Created Successfully: 'test'
cdm <- TestGenerator::patientsCDM(pathJson = tempdir(), testName = "test")
#> 
#> Download completed!
#> Creating CDM database /tmp/Rtmpkjyvn4/empty_cdm_5.3.zip
#> ■■■■■■■■■■■■■■■■■■■■■■            70% | ETA:  2s
#> ■■■■■■■■■■■■■■■■■■■■■■■■■■■       86% | ETA:  2s
#> ■■■■■■■■■■■■■■■■■■■■■■■■■■■■      89% | ETA:  2s
#> Note: method with signature ‘DBIConnection#Id’ chosen for function ‘dbExistsTable’,
#>  target signature ‘duckdb_connection#Id’.
#>  "duckdb_connection#ANY" would also be valid
#> ! cdm name not specified and could not be inferred from the cdm source table
#> ✔ Patients pushed to blank CDM successfully
duckdb::duckdb_shutdown(duckdb::duckdb())
# }