Check whether a cohort table satisfies requirements — checkCohortRequirements • omopgenerics

Usage

checkCohortRequirements(
  cohort,
  checkEndAfterStart = TRUE,
  checkOverlappingEntries = TRUE,
  checkMissingValues = TRUE,
  checkInObservation = TRUE,
  type = "error",
  call = parent.frame()
)

Arguments

cohort: cohort_table object.
checkEndAfterStart: If TRUE a check that all cohort end dates come on or after cohort start date will be performed.
checkOverlappingEntries: If TRUE a check that no individuals have overlapping cohort entries will be performed.
checkMissingValues: If TRUE a check that there are no missing values in required fields will be performed.
checkInObservation: If TRUE a check that cohort entries are within the individuals observation periods will be performed.
type: Can be either "error" or "warning". If "error" any check failure will result in an error, whereas if "warning" any check failure will result in a warning.
call: The call for which to return the error message.

Value

An error will be returned if any of the selected checks fail.