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Get descendant codes for drug ingredients
getDrugIngredientCodes.Rd
Get descendant codes for drug ingredients
Usage
getDrugIngredientCodes(
cdm,
name = NULL,
nameStyle = "{concept_code}_{concept_name}",
doseForm = NULL,
doseUnit = NULL,
routeCategory = NULL,
ingredientRange = c(1, Inf),
type = "codelist"
)
Arguments
- cdm
cdm_reference via CDMConnector
- name
Names of ingredients of interest. For example, c("acetaminophen", "codeine"), would result in a list of length two with the descendant concepts for these two particular drug ingredients. Users can also specify the concept ID instead of the name (e.g., c(1125315, 42948451)) using a numeric vector.
- nameStyle
Name style to apply to returned list. Can be one of
"{concept_code}_{concept_name}"
,"{concept_code}"
, or"{concept_name}"
.- doseForm
Only descendants codes with the specified dose form will be returned. If NULL, descendant codes will be returned regardless of dose form.
- doseUnit
Only descendants codes with the specified dose unit will be returned. If NULL, descendant codes will be returned regardless of dose unit
- routeCategory
Only descendants codes with the specified route will be returned. If NULL, descendant codes will be returned regardless of route category.
- ingredientRange
Used to restrict descendant codes to those associated with a specific number of ingredients. Must be a vector of length two with the first element the minimum number of ingredients allowed and the second the maximum. A value of c(2, 2) would restrict to only concepts associated with two ingredients.
- type
Can be "codelist", "codelist_with_details", or "concept_set_expression"
Examples
# \donttest{
cdm <- mockVocabRef()
#> Warning: There are observation period end dates after the current date: 2025-02-19
#> ℹ The latest max observation period end date found is 2025-12-31
getDrugIngredientCodes(cdm = cdm, name = "Adalimumab",
nameStyle = "{concept_name}")
#>
#> ── 1 codelist ──────────────────────────────────────────────────────────────────
#>
#> - adalimumab (2 codes)
# }