TreatmentPathways

Module that displays the Treatment Pathways from the TreatmentPatterns package.

Super class

DarwinShinyModules::ShinyModule -> TreatmentPathways

Active bindings

colours

(list) Hex colour values used in the Sunburst Plots and Sankey Diagrams.

sunburst

(PlotWidget) Module.

sankey

(PlotWidget) Module.

inputPanel

(InputPanel) Module.

table

Table displaying the treatment_pathways csv-file.

sunburstOverview

(list) Containing Sunburst PlotWidget modules.

treatmentPathways

(data.frame)

cdmSourceInfo

(data.frame)

Methods

Public methods

• TreatmentPathways$new()

• TreatmentPathways$clone()

Inherited methods

• DarwinShinyModules::ShinyModule$UI()
• DarwinShinyModules::ShinyModule$getReactiveValues()
• DarwinShinyModules::ShinyModule$server()
• DarwinShinyModules::ShinyModule$validate()

---

Method new()

Initializer method

Usage

TreatmentPathways$new(treatmentPathways, cdmSourceInfo, ...)

Arguments

treatmentPathways

(data.frame) treatment_pathways field from the TreatmentPatternsResult object.

cdmSourceInfo

(data.frame) cdm_source_info field from the TreatmentPatternsResult object.

...

Additional parameters to set fields from the ShinyModule parent.

Returns

self

---

Method clone()

The objects of this class are cloneable with this method.

Usage

TreatmentPathways$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

Examples

{
  if (interactive()) {
    library(DarwinShinyModules)

    tpr <- TreatmentPatterns::TreatmentPatternsResults$new(
      filePath = system.file(package = "DarwinShinyModules", "dummyData/TreatmentPatterns/3.0.0/")
    )

    treatmentPathways <- TreatmentPathways$new(
      treatmentPathways = tpr$treatment_pathways,
      cdmSourceInfo = tpr$cdm_source_info
    )

    preview(treatmentPathways)
  }
}