Run benchmark of incidence and prevalence analyses

Usage

benchmarkIncidencePrevalence(
  cdm,
  returnParticipants = FALSE,
  analysisType = "all"
)

Arguments

cdm: A CDM reference object
returnParticipants: Whether to return participants
analysisType: A string of the following: "all", "only incidence", "only prevalence"

Value

a tibble with time taken for different analyses

Examples

# \donttest{
cdm <- mockIncidencePrevalenceRef(
  sampleSize = 100,
  earliestObservationStartDate = as.Date("2010-01-01"),
  latestObservationStartDate = as.Date("2010-01-01"),
  minDaysToObservationEnd = 364,
  maxDaysToObservationEnd = 364,
  outPre = 0.1
)

timings <- benchmarkIncidencePrevalence(cdm)
#> Loading required namespace: testthat
#> ℹ Creating denominator cohorts
#>  -- getting cohort dates for ■■■■■■■■■■■■■■■■                 4 of 8 cohorts
#>  -- getting cohort dates for ■■■■■■■■■■■■■■■■■■■■■■■■■■■■■■■  8 of 8 cohorts
#> ✔ Cohorts created in 0 min and 8 sec
#> Getting prevalence for analysis 1 of 16
#> Getting prevalence for analysis 2 of 16
#> Getting prevalence for analysis 3 of 16
#> Getting prevalence for analysis 4 of 16
#> Getting prevalence for analysis 5 of 16
#> Getting prevalence for analysis 6 of 16
#> Getting prevalence for analysis 7 of 16
#> Getting prevalence for analysis 8 of 16
#> Getting prevalence for analysis 9 of 16
#> Getting prevalence for analysis 10 of 16
#> Getting prevalence for analysis 11 of 16
#> Getting prevalence for analysis 12 of 16
#> Getting prevalence for analysis 13 of 16
#> Getting prevalence for analysis 14 of 16
#> Getting prevalence for analysis 15 of 16
#> Getting prevalence for analysis 16 of 16
#> Time taken: 0 mins and 2 secs
#> Getting prevalence for analysis 1 of 16
#> Getting prevalence for analysis 2 of 16
#> Getting prevalence for analysis 3 of 16
#> Getting prevalence for analysis 4 of 16
#> Getting prevalence for analysis 5 of 16
#> Getting prevalence for analysis 6 of 16
#> Getting prevalence for analysis 7 of 16
#> Getting prevalence for analysis 8 of 16
#> Getting prevalence for analysis 9 of 16
#> Getting prevalence for analysis 10 of 16
#> Getting prevalence for analysis 11 of 16
#> Getting prevalence for analysis 12 of 16
#> Getting prevalence for analysis 13 of 16
#> Getting prevalence for analysis 14 of 16
#> Getting prevalence for analysis 15 of 16
#> Getting prevalence for analysis 16 of 16
#> Time taken: 0 mins and 2 secs
#> Getting incidence for analysis 1 of 16
#> Getting incidence for analysis 2 of 16
#> Getting incidence for analysis 3 of 16
#> Getting incidence for analysis 4 of 16
#> Getting incidence for analysis 5 of 16
#> Getting incidence for analysis 6 of 16
#> Getting incidence for analysis 7 of 16
#> Getting incidence for analysis 8 of 16
#> Getting incidence for analysis 9 of 16
#> Getting incidence for analysis 10 of 16
#> Getting incidence for analysis 11 of 16
#> Getting incidence for analysis 12 of 16
#> Getting incidence for analysis 13 of 16
#> Getting incidence for analysis 14 of 16
#> Getting incidence for analysis 15 of 16
#> Getting incidence for analysis 16 of 16
#> Overall time taken: 0 mins and 7 secs
# }