Package index • IncidencePrevalence

Build denominator cohorts

generateDenominatorCohortSet(): Identify a set of denominator populations

generateTargetDenominatorCohortSet(): Identify a set of denominator populations using a target cohort

Estimate incidence rates

estimateIncidence(): Collect population incidence estimates

Estimate point and period prevalence

estimatePeriodPrevalence(): Estimate period prevalence

estimatePointPrevalence(): Estimate point prevalence

Plot results

optionsPlot(): List of parameter options for IncidencePrevalence plot functions.

plotIncidence(): Plot incidence results

plotPrevalence(): Plot prevalence results

Tabulate results

optionsTableIncidence(): Additional arguments for the functions tableIncidence.

optionsTablePrevalence(): Additional arguments for the functions tablePrevalence.

tableIncidence(): Table of incidence results

tableIncidenceAttrition(): Table of incidence attrition results

tablePrevalence(): Table of prevalence results

tablePrevalenceAttrition(): Table of prevalence attrition results

Mock data

mockIncidencePrevalence() mockIncidencePrevalenceRef() deprecated: Generate example subset of the OMOP CDM for estimating incidence and prevalence

Benchmark package

benchmarkIncidencePrevalence(): Run benchmark of incidence and prevalence analyses